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Gender Determination of iPSC

Overview Service Features Published Data FAQs Scientific Resources Related Services

Creative Biolabs is the world-leading expert in the field of iPSC technology. Based on our extensive experience and advanced platform, we can provide various services regarding iPSC including iPSC generation and applications. Now we offer the gender determination service of iPSC.

Introduction of iPSC Gender Determination

Derived from adult somatic cells by iPSC reprogramming, the induced pluripotent stem cells (iPSCs) shows great potential in the field of disease modeling, regenerative therapies, and development studies. In general, the gender determination is a two-step process regulated by hormone production and gender chromosome content. The gender chromosome content drives the differentiation of bipotential gonadal ridges into either ovary or testis. Subsequently, a range of physiological characteristics are established by gender hormones. It has been reported that the presence of the Y chromosome and specifically related gene SRY may play important roles in gender determination during the growth and differentiation of iPSCs.

The structure of SRY.Fig.1 The structure of SRY.

The Factors for iPSC Gender Determination

SRY protein is a DNA-binding protein encoded by the SRY gene which is located in the X degenerate region of the Y chromosome. It has been found that the gender-determination gene SRY can be expressed in the male iPSCs. Furthermore, the expression of SRY may affect the autosomal gene expression and result in differences in steroid metabolism. SRY expression is induced by reprogramming of male fibroblasts to iPSCs and the reduced expression levels of OCT-4 and NANOG may affect its expression. In addition, the differences in autosomal gene expression between male and female iPSCs have also been detected. We found that only part of genes differentially expressed relate to SRY-binding sites which means SRY is only partly responsible for the differential gene expression between male and female. In this case, these are three groups of gender-differential genes: (1) genes involved in cholesterol synthesis (DHCR24, SQLE, and CYP51A1), (2) genes involved in the generation of gender steroids (SRD5A3 and HSD17B12), and (3) genes involved in cholesterol or steroid homeostasis (OSBPL9, PCSK9, ABCA1, HDLBP, PBX1, and CPT1C). In summary, during the early iPSC development, the Y chromosome and male-specific gene SRY present great contribution to sex-dimorphic traits.

SRY in steroid hormone production and gender dimorphism.Fig.2 SRY in steroid hormone production and gender dimorphism.

Along with over a decade rich experience in iPSC technology, Creative Biolabs now provides various services regarding iPSC generation and iPSC applications. We are confident in offering the highly efficient services and products in good quality to our customers all over the world. If you are interested in our services, please do not hesitate to contact us for more details.

Services at Creative Biolabs

This service is crucial for studies where gender-specific responses and genetic backgrounds play a significant role in experimental outcomes. Our methodology ensures reliable and reproducible results, enhancing the integrity of your research.

  • Sample Preparation and Quality Control: We accept various biological materials for iPSC generation, including fibroblasts, blood cells, and other somatic cells. Each sample undergoes rigorous quality control checks to ensure the viability and integrity of the cells.
  • iPSC Generation: Utilizing state-of-the-art reprogramming techniques such as Sendai virus, episomal vectors, or mRNA-based methods, we generate high-quality iPSCs from your samples. Post-reprogramming, the iPSCs are characterized for pluripotency markers (OCT4, SOX2, NANOG) using immunocytochemistry and qPCR.
  • Gender Determination: We employ a combination of molecular techniques to determine the gender of the iPSCs.
    • Karyotyping: Conventional G-banding to visualize chromosomal structures and identify XX (female) or XY (male) karyotypes.
    • Fluorescence In Situ Hybridization (FISH): Specific probes targeting the X and Y chromosomes to confirm gender.
    • PCR-based Methods: Amplification of gender-specific markers such as SRY (sex-determining region Y) gene for males and XIST (X-inactive specific transcript) gene for females.
    • Next-Generation Sequencing (NGS): Comprehensive analysis of the genome to confirm gender and identify any chromosomal abnormalities.

A comprehensive report is provided, detailing the methods used, quality control results, and conclusive evidence of the iPSC gender. Upon request, we can supply the raw data files from karyotyping, FISH, PCR, and NGS analyses. Our team of experts is available for consultation to discuss the findings and their implications for your research.

Features of Our Services

  • Combining multiple methodologies ensures high accuracy and reliability of gender determination.
  • Our team comprises experienced scientists with extensive expertise in stem cell biology and genetic analysis.
  • We maintain strict confidentiality and data security protocols to protect your research data.
  • We offer customizable service packages to cater to specific research needs and experimental designs.

To utilize our gender determination of iPSC, please contact our customer support team to discuss your project requirements. We provide full support from sample submission to data interpretation, ensuring a seamless experience for your research endeavors. We look forward to assisting you with your gender determination and stem cell research needs.

Published Data

Below are the findings presented in the article related to gender determination of iPSC.

Ke-Qian Di, et al. induced the generation of iPSCs from sex-mixed mouse embryonic fibroblasts (MEFs) with different starting sex ratios using the widely accepted iPSC generation system. The initial mixed-sex MEFs were divided into three groups: 10% XY + 90% XX, 30% XY + 70% XX, and 50% XY + 50% XX. After induction, the sex of the GFP-positive single iPSC clones was determined by PCR using primers targeting the male-specific Sry gene, and the PCR results were validated using FISH and chromosomal G-banding analysis.

The results indicated that the sex-mixing induction strategy may lead to an imbalance in the iPSC sex ratio. After reprogramming, different proportions of female initiating MEFs with different male ratios produced different proportions of female iPSCs, respectively. Moreover, these female iPSCs had the pluripotency typical of embryonic stem cells.

Fig.3 Studying the sex ratio of iPSCs. (Di, Ke-Qian, et al., 2015)Fig. 3 Aberrant sex ratio in mouse iPSCs.2

FAQs

  • Q: How accurate is your gender determination service for iPSCs?
    A: Our service boasts an accuracy rate of over 99%. We use highly sensitive and specific genetic markers to ensure precise gender determination. Our protocols are rigorously validated, and we include multiple controls in each analysis to avoid errors.
  • Q: What types of samples do you accept for gender determination? And how do I submit my iPSC samples?
    A: We accept a variety of sample types, including cell pellets, DNA extracts, and even whole iPSC colonies. If you have a specific type of sample that you're unsure about, please contact us, and we can guide you on the best way to prepare and submit your samples. You can submit your samples by following our detailed sample submission guidelines, which are available on our website. These guidelines include instructions on how to prepare and ship your samples to ensure they arrive in optimal condition.
  • Q: Can your service determine the gender of iPSCs if they are part of a mixed cell population?
    A: Determining the gender of iPSCs within a mixed cell population can be challenging. However, we can use specific molecular markers and FISH techniques to identify and differentiate male and female cells within the mix. It's important to provide detailed information about your sample so we can tailor our approach accordingly.
  • Q: Is it possible to determine the gender of iPSCs from low-quality or degraded samples?
    A: While high-quality samples yield the most reliable results, we understand that sometimes only low-quality or partially degraded samples are available. We can attempt gender determination from such samples using specialized techniques designed to maximize data recovery. However, the success rate may vary, and we will provide an assessment of sample quality and feasibility before proceeding.
  • Q: What are the limitations of your gender determination service?
    A: While our gender determination service is highly accurate, there are some limitations. Rare cases of chromosomal abnormalities, such as mosaicism or aneuploidy, may complicate the analysis. Additionally, extremely degraded or contaminated samples may yield less reliable results. We always perform a preliminary quality assessment and will inform you of any potential limitations before proceeding.

Scientific Resources

References

  1. Ronen, Daniel, and Nissim Benvenisty. "Sex-dependent gene expression in human pluripotent stem cells." Cell reports 8.4 (2014): 923-932.
  2. Di, Ke-Qian, et al. "Generation of fully pluripotent female murine-induced pluripotent stem cells." Biology of Reproduction 92.5 (2015): 123-1.

For Research Use Only. Not For Clinical Use.